Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954155.1_cds_XP_016493086.1_83232
CDS Infomation

[gene=LOC107812476] [db_xref=GeneID:107812476] [protein=glycerophosphodiester phosphodiesterase GDPD1, chloroplastic-like] [protein_id=XP_016493086.1] [location=complement(join(40189..40420,40521..40717,40913..41008,41111..41311,41390..41470,41564..41623,42582..42784,42884..42959))] [gbkey=CDS]
Sequence

ATGGCTCTTAAAGCAGTTCCAGTTTCTCAAGTTCCATACATTGATCAATTCCATGAAAAT
AATGCCCTCTACAATGGGGAAGATGATGTTGGGGAGAGGAGAAAAATGGCAACATTCATT
TTAAAGGAGAATAAGTTTGTAGTGATGGGACATAGAGGAAGTGGAATGAATATTTTGCAA
TCTTGTGATAGGAGATCAAAAGCAATTAAAGAGAATACTTTGTGTTCATTCAATGAAGCT
GCTAAATTCAACGTCGACTTCATCGAATTTGATGTTCAGGTAACAAGAGATGGCCATCCA
GTTATTTTCCATGATATCTTCATTCTTACACAAGAAGAGGGAAAGTTGATTGAGAAAAGA
GTAACAGACCTCACATTGGAGGAGTTTCTTTCATATGGACCACAGAATGCCTCAACAAAC
GTGGAAAAACCTTTATTCAGAAAAACGAAAGATGGGAGAATCTTTGAATGGAAAGTCGAC
GAGGATGATCGATTCTGTACGCTAGAAGATGTGTTCGAGAATGCCAGTCAGTCTGTAGGA
TTTAACATTGAGTTCAAGCTTGATGATAACACAAGTTATAAAGAAGAAGAACTTGTTCGT
GTTATTCTAGCAGTTTTGCAGGTAGTGTTCAAGCATGCCAAAAGTAGGTGCATTATGTTC
TCAAGCTTCCAACCAGATGCAGCTCAATTGATCAGGAAGCAACAGACCACTTATCCGGTT
TTCTTCCTAACAAATGGAGGATCTGAAATCTATTCCGACATAAGAAGGAACTCATTGGAT
GAGGCAATTAAGTTGTGCTTAGAAGGTGATCTACAAGGAATTGTCTCAGAGGTCAAAGCC
ATTTTAAGAAATCCAACAATGATAGCAAAAATCAAAGAATTCAAACTTTCCATTTTGACA
TATGGCCAGCTAAATAATGAGCAGGAGGTGGTTCACTTGCAATTCATGATGGGTGTTGAG
GGAGTAATTGTAGATTTTGTTAAAGAGATTACTTTAGCTGTTTCTCAGTTTTCGAAACCA
GTTTATGCTGGAAAAGAAGGTTTGTCATTGTTGGAGAAGAGCCAACTAGCAGAGAAACGA
ACTCCCTGTTCGGACGATGAACTCTCATATTTCCGTAGGCTTGTTCCAGAGTTAATACAT
TCTTGA

Peptide Sequence

PEP ID

XP_016493086.1
PEP Infomation

PREDICTED: glycerophosphodiester phosphodiesterase GDPD1, chloroplastic-like [Nicotiana tabacum]
Sequence

MALKAVPVSQVPYIDQFHENNALYNGEDDVGERRKMATFILKENKFVVMGHRGSGMNILQ
SCDRRSKAIKENTLCSFNEAAKFNVDFIEFDVQVTRDGHPVIFHDIFILTQEEGKLIEKR
VTDLTLEEFLSYGPQNASTNVEKPLFRKTKDGRIFEWKVDEDDRFCTLEDVFENASQSVG
FNIEFKLDDNTSYKEEELVRVILAVLQVVFKHAKSRCIMFSSFQPDAAQLIRKQQTTYPV
FFLTNGGSEIYSDIRRNSLDEAIKLCLEGDLQGIVSEVKAILRNPTMIAKIKEFKLSILT
YGQLNNEQEVVHLQFMMGVEGVIVDFVKEITLAVSQFSKPVYAGKEGLSLLEKSQLAEKR
TPCSDDELSYFRRLVPELIHS

Transcript Sequence

Gene sequence data has not been registered.